Welcome to the Biodata system

Welcome to the Biodata system hosted at the Center for Computational Genomics & Bioinformatics. This is where we store DNA sequence data. The sequence data is organized first by project, then by submissions and contigs within projects. In the table below, you will find all of the projects for which we keep sequence data. Click on a project title below to begin navigating the Biodata tree.

View the administrator's guide.
View the installation guide.

View a graphic of the filesystem tree structure


Submit a sequence to BLAST

In addition to storing DNA sequence data, you can run BLAST on some of our specialized databases. Run BLAST

Hosted projects

Arachis hypogaea

Peanut

Balsamifera subsp. trichocarpa

Functional Genomics of Regulation in Forest Trees - pre-release

Functional Genomics of Regulation in Forest Trees

Bos taurus

USDA Bovine

Brassica napus

Brassica napus Sequence Analysis Project

Eucalyptus camaldulensis

Eucalyptus camaldulensis EST project of ForBio in Australia

Eucalyptus globulus

Eucalyptus globulus EST project of ForBio in Australia

Euphorbia esula

Pilot euphorbia

Felis catus

Kanjilal Lab - Intramural

Glycine max

Public EST Project for Soybean

A Functional Genomics Program for Soybean

Ictalurus punctatus

USDA Ictalarus

Medicago truncatula

Medicago truncatula as the Nodal Species for Comparative and Functional Legume Genomics - Unigene (NSF)

Medicago truncatula as the Nodal Species for Comparative and Functional Legume Genomics (NSF/U. Georgia)

Medicago Genome Initiative (S.R. Noble Foundation)

Medicago truncatula as the Nodal Species for Comparative and Functional Legume Genomics (NSF)

Functional Genomics in Medicago truncatula (INRA)

Medicago truncatula as the Nodal Species for Comparative and Functional Legume Genomics

Medicago project - Europe

Towards the complete gene inventory and function of the Medicago truncatula genome

Medicago: Genetics and Signal Transduction

Picea glauca

Functional Genomics of Regulation in Forest Trees

Functional Genomics of Regulation in Forest Trees - pre-release

Pinus taeda

Pine Gene Discovery

Loblolly Pine Pilot Project

Molecular Basis of Wood Formation in the Pine Megagenome

NCSU Pine EST

Porcine reproductive and respiratory syndrome virus

PRRSV

Robinia pseudoacacia

Genomics of Heartwood Formation

Staphylococcus aureus

Closing gaps in StaphaB

Sus Scrofa

sus_scrofa_pp

Sus scrofa

Sequencing of the Swine MHC

Increasing Litter Size in Swine through Molecular Genetic means

Development of a High Resolution EST Radiation Hybrid map for Swine

USDA Swine

Theobroma cacao

Pilot Cocoa

Triticum aestivum

The Structure and Function of the Expressed Portion of the Wheat Genomes

Zea mays

Maize gene discovery, DNA sequencing, and phenotypic analysis

candida albicans

Candida Array

This page created Mon Jan 16 03:22:01 2006.

© Copyright 2006, The Regents of the University of Minnesota

This page was generated by software that was developed at the Center for Computational Genomics and Bioinformatics, University of Minnesota. We gratefully acknowledge the support of the USDA Agricultural Research Service for their financial support of this work, under a Co-operative Agreement, and the U.S. National Science Foundation for support under several grants under the Plant Genome Research Program.

For further information contact CCGB pipeline@ccgb.umn.edu