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Project information

files submissions
kingdom Planta
species Balsamifera subsp. trichocarpa
Clone_Availability To order clones, visit Arborea web site at www.arborea.ulaval.ca
PI John MacKay
agency Genome Quebec
grantname Functional Genomics of Regulation in Forest Trees
grant poplar
family Populus

Table definitions (Metadata)


Submit a sequence to BLAST

In addition to viewing DNA sequence data, you can run BLAST on some of our specialized databases. Run BLAST at CCGB

Sequence and sequence information search tools

Additional help on searching BLAST reports.

Search BLAST reports in poplar


More information on searching BLAST reports in poplar

Find a sequence in poplar


Use this field to find a sequence in poplar by any known name.
Help on using this tool.

Contig sets in poplar

This table lists the contig sets that have been run against poplar. CCGB uses the program Phrap to create contigs. For more information, see METHODS

Library - March 2004 MacKay Poplar without defense libraries   Date - Apr 7 2004   Contig set - contig_dir1
Library - March 2004 MacKay Poplar without defense libraries   Date - Sep 28 2004   Contig set - contig_dir2

Sequence length distribution in poplar


Average length of 8907 sequences is 572


Submissions in poplar

GQ009 GQ010 GQ011 GQ012 GQ015 GQ024

This page created Mon Aug 25 05:52:13 2008.

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This page was generated by software that was developed at the Center for Computational Genomics and Bioinformatics, University of Minnesota. We gratefully acknowledge the support of the USDA Agricultural Research Service for their financial support of this work, under a Co-operative Agreement, and the U.S. National Science Foundation for support under several grants under the Plant Genome Research Program.

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