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Project information

URL www.arborea.ulaval.ca
files submissions
kingdom Planta
species Picea glauca
Clone_Availability To order clones, visit Arborea web site at www.arborea.ulaval.ca
PI John MacKay
agency Genome Quebec
grantname Functional Genomics of Regulation in Forest Trees
grant spruce
family Pinaceae

Table definitions (Metadata)


Submit a sequence to BLAST

In addition to viewing DNA sequence data, you can run BLAST on some of our specialized databases. Run BLAST at CCGB

Sequence and sequence information search tools

Additional help on searching BLAST reports.

Search BLAST reports in spruce


More information on searching BLAST reports in spruce

Find a sequence in spruce


Use this field to find a sequence in spruce by any known name.
Help on using this tool.

Contig sets in spruce

This table lists the contig sets that have been run against spruce. CCGB uses the program Phrap to create contigs. For more information, see METHODS

Library - bioDATA_spruce1   Date - Jan 8 2004   Contig set - contig_dir1
Library - spruce_jan30_2003   Date - Mar 1 2006   Contig set - contig_dir8
Library - spruce_may13_2005   Date - Mar 1 2006   Contig set - contig_dir10

Sequence length distribution in spruce


Average length of 57193 sequences is 656


Submissions in spruce

GQ001 GQ002 GQ003 GQ004 GQ006 GQ007 GQ008 GQ013
GQ016 GQ017 GQ018 GQ019 GQ020 GQ022 GQ025 GQ026
GQ027 reracks

This page created Mon Aug 25 05:56:47 2008.

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This page was generated by software that was developed at the Center for Computational Genomics and Bioinformatics, University of Minnesota. We gratefully acknowledge the support of the USDA Agricultural Research Service for their financial support of this work, under a Co-operative Agreement, and the U.S. National Science Foundation for support under several grants under the Plant Genome Research Program.

For further information contact CCGB pipeline@ccgb.umn.edu